Swirled Chocolate Cupcakes Recipe – Easy Homemade Ganache Filled Treats

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The first time I bit into one of these swirled chocolate cupcakes, I nearly dropped my fork. Imagine a tender, marbled chocolate cupcake with a surprise core of silky ganacheβ€”the kind of treat that makes you pause mid-bite and just sigh in happiness.

I started baking these cupcakes on a rainy Sunday afternoon. You know those days when you want something cozy, but also a little bit decadent? That’s exactly when this swirled chocolate cupcakes recipe was born. I’d run out of plain chocolate chips and decided to swirl in some creamy white chocolate too. The result: a cupcake that’s both eye-catching and absolutely irresistible.

What makes these cupcakes extra special is the creamy ganache filling. It’s not just for showβ€”it’s rich, smooth, and melts right into the marbled crumb. I’ve made these for birthday parties, bake sales, and honestly, just because I wanted a treat with my coffee. Whether you’re a beginner or a seasoned baker, you won’t believe how easy homemade ganache-filled treats can be.

These swirled chocolate cupcakes are perfect for families (kids love helping with the swirling!), but they’re also impressive enough for grown-up gatherings. The best part? You don’t need fancy equipment or rare ingredientsβ€”just simple pantry staples and a willingness to get a little chocolate on your hands. After baking these more times than I can count, I can say with confidence: this is the chocolate cupcake recipe you’ll come back to, again and again.

Why You’ll Love This Swirled Chocolate Cupcakes Recipe

  • Quick & Easy: Whip up the batter in under 20 minutesβ€”no need to chill, fuss, or stress. Perfect for last-minute cravings or when you want to bake with the kids.
  • Simple Ingredients: All you need are baking basics like flour, cocoa powder, eggs, and chocolate. If you’ve got chocolate chips (dark and white), you’re already halfway there!
  • Perfect for Any Occasion: These cupcakes shine at birthdays, potlucks, holidays, or cozy nights in. They’re equally at home on a fancy platter or in a lunchbox.
  • Crowd-Pleaser: I’ve never met a person who didn’t reach for seconds. The marbled swirl and gooey ganache filling make these cupcakes absolutely unforgettable.
  • Unbelievably Delicious: The texture is moist and tender, with that dreamy, creamy ganache at the center. The chocolate flavor is rich but not overpoweringβ€”a true comfort food treat.

What sets this swirled chocolate cupcakes recipe apart? It’s the swirlβ€”half dark chocolate, half white chocolate, so every bite is a little different. And then there’s the ganache filling, which is surprisingly easy to make (just two ingredients!) but tastes like something from a fancy bakery.

Honestly, there’s a little magic to pulling these cupcakes out of the oven, swirling the batter just so, and knowing there’s a hidden chocolate core inside. It’s the kind of dessert that makes people ask, β€œWait, you made these?!” If you’re looking for a chocolate cupcake with a twistβ€”something a little more special than your averageβ€”this recipe is for you.

For me, these cupcakes are like edible hugs: comforting, reliable, and always welcome at the table. They’re perfect for impressing guests, spoiling your family, or simply treating yourself after a long week. Plus, you can make them ahead, freeze them, or eat them warm from the oven (no judgment here!).

What Ingredients You Will Need

This swirled chocolate cupcakes recipe relies on simple, approachable ingredients. You probably have most of these on hand already. Here’s what you’ll need to create those gorgeous swirls and creamy ganache centers:

  • For the Cupcake Batter:
    • All-purpose flour (120g) – provides structure
    • Unsweetened cocoa powder (30g) – use Dutch-processed for deeper flavor
    • Granulated sugar (150g) – for sweetness and moisture
    • Light brown sugar (50g) – adds depth and a touch of caramel flavor
    • Unsalted butter (85g, softened) – for richness (substitute with vegan butter if needed)
    • Vegetable oil (60ml) – keeps cupcakes extra moist
    • Eggs (2 large, room temp) – binds everything together
    • Vanilla extract (2 tsp) – adds warmth and aroma
    • Whole milk (120ml, room temp) – for a tender crumb (dairy-free milk works too)
    • Baking powder (1 Β½ tsp) – lifts the batter
    • Baking soda (Β½ tsp) – helps with rise and texture
    • Salt (ΒΌ tsp) – balances flavor
    • Dark chocolate chips (75g) – for the chocolate swirl
    • White chocolate chips (75g) – for a creamy, sweet contrast
  • For the Ganache Filling:
    • Dark chocolate (100g, chopped or chips) – I recommend 60–70% cacao for a balanced ganache
    • Heavy cream (100ml) – makes the ganache rich and smooth (use coconut cream for dairy-free)
  • For the Topping (optional):
    • Extra chocolate shavings or sprinkles – for decoration
    • Powdered sugar – a light dusting looks beautiful

You can easily swap ingredients to fit your needs. For gluten-free, use a 1:1 gluten-free baking blend. If you want to cut down on sugar, try a natural sweetener like coconut sugarβ€”just know the flavor will change a bit. I’ve made these with almond milk and they still turn out super moist.

For the chocolates, I usually go with Ghirardelli or Guittard, but honestly, any good-quality chocolate will work. Just avoid baking meltsβ€”they don’t taste as rich in the ganache.

Tip: If you’re making these during the holidays, try adding a pinch of cinnamon or espresso powder to the batter for a seasonal twist. And don’t worry if you’re out of white chocolateβ€”these are just as tasty with all dark chocolate swirls.

Equipment Needed

For this swirled chocolate cupcakes recipe, you really don’t need a fancy kitchen setup. Here’s what I use every time:

  • 12-cup muffin pan – standard size works best (nonstick or lined with paper cupcake liners)
  • Two mixing bowls – one for wet, one for dry ingredients
  • Whisk and spatula – for mixing and folding
  • Measuring cups and spoons (or a digital kitchen scale for accuracy)
  • Microwave-safe bowl or small saucepan – for melting chocolate and cream
  • Hand mixer or stand mixer – speeds things up, but you can use a sturdy whisk and some muscle
  • Toothpick or wooden skewer – for swirling the batter
  • Spoon or small cookie scoop – to fill the cupcake liners evenly

If you don’t have a stand mixer, no worries. I made these with just a whisk for years! For the ganache, a microwave-safe bowl makes melting chocolate easy, but a double boiler or small heavy-bottomed pot does the trick too. Pro tip: if your muffin tin is old and sticky, a quick rub of butter or a spritz of nonstick spray helps prevent stuck cupcakes.

If you’re just starting out, there’s no need to splurge on equipment. I picked up my muffin pan at a thrift store for a couple bucksβ€”still works perfectly! Remember to wash and dry your mixing bowls well if you use them for both the batter and ganache (leftover moisture can mess with chocolate texture).

Preparation Method

swirled chocolate cupcakes preparation steps

  1. Preheat and Prep: Preheat your oven to 350Β°F (175Β°C). Line a 12-cup muffin tin with cupcake liners or grease lightly with butter.
  2. Make the Ganache Filling: Place 100g chopped dark chocolate in a heatproof bowl. In a small saucepan or microwave-safe cup, heat 100ml heavy cream just until it starts to simmer (don’t let it boil!). Pour the hot cream over the chocolate and let sit for 1 minute. Stir gently until smooth and glossy. Set aside to cool and thicken slightly, about 15–20 minutes. (If your kitchen is warm, pop it in the fridge for a few minutesβ€”but don’t forget it, or it’ll harden!)
  3. Mix Dry Ingredients: In a large bowl, whisk together 120g all-purpose flour, 30g unsweetened cocoa powder, 150g granulated sugar, 50g light brown sugar, 1 Β½ tsp baking powder, Β½ tsp baking soda, and ΒΌ tsp salt. Whisk well to combine and break up any cocoa lumps.
  4. Mix Wet Ingredients: In another bowl, beat 85g softened butter and 60ml vegetable oil until smooth and creamy (about 1 minute with a hand mixer, or 2 minutes by hand). Beat in 2 large eggs, one at a time, then add 2 tsp vanilla extract. Gradually mix in 120ml whole milk.
  5. Combine Batter: Add the wet ingredients to the dry ingredients. Mix gently until just combinedβ€”don’t overmix, or the cupcakes can get dense. The batter should be thick but smooth. If it looks a little lumpy, that’s okayβ€”just make sure there are no flour pockets.
  6. Add Swirl Chocolates: Gently fold in 75g dark chocolate chips and 75g white chocolate chips. For a more dramatic swirl, you can melt half the chips and fold them in separate batches, but tossing them in whole works great too. (I’ve done both; both are delicious!)
  7. Fill Cupcake Liners: Spoon a heaping tablespoon of batter into each cupcake liner. Using the back of the spoon, make a small well in the center of each. Drop about 1 teaspoon of cooled ganache into the well. Top with another tablespoon of batter, covering the ganache completely. Each liner should be about 3/4 full.
  8. Swirl the Batter: Using a toothpick or skewer, gently swirl the batter and ganache together in each cupcake. Don’t overdo itβ€”you want distinct swirls, not a muddled mess. (If you swirl too much, the cupcakes will turn solid brown. Still tasty, just less pretty!)
  9. Bake: Bake in the preheated oven for 18–20 minutes, or until a toothpick inserted at the edge (not the center, because of the ganache) comes out clean. If you poke right through the ganache, the toothpick will look chocolatyβ€”don’t worry, that’s normal.
  10. Cool: Let the cupcakes cool in the pan for 5 minutes, then transfer to a wire rack to cool completely. The ganache will set as the cupcakes cool.
  11. Decorate (optional): Once cooled, dust with powdered sugar, top with extra chocolate shavings, or drizzle with leftover ganache. (I sometimes sneak a warm one right out of the panβ€”can you blame me?)

Troubleshooting: If your ganache is too runny, chill it for a few minutes. If it’s too stiff, microwave for 5 seconds and stir. If cupcakes sink in the middle, the oven may be too cool or the batter overmixed. Don’t stressβ€”just cover with extra topping and enjoy!

Tip: For efficiency, make the ganache first, then prep the batter while it cools. Clean as you go, or enlist a helper (my kids love swirling the batter!).

Cooking Tips & Techniques

I’ve learned a few tricks (the hard way) while perfecting this swirled chocolate cupcakes recipe:

  • Room Temperature Ingredients: Butter, eggs, and milk blend together better and make for a lighter cake. Cold ingredients can make the batter seize up or bake unevenly.
  • Don’t Overmix: Stir the batter just until you don’t see any dry flour. Overmixing can make the cupcakes tough and dense. Trust me, I’ve baked a few hockey pucks in my time!
  • Use a Cookie Scoop: For even cupcakes, a medium cookie scoop is a game-changer. You’ll avoid overfilling and get perfect domes every time.
  • Swirling Technique: Less is more. Gently swirl the batter with a skewer, making a figure-eight motion. If you go wild, the swirl disappears and the texture can get gummy.
  • Baking Time: Every oven is a little different. Check cupcakes at the minimum time. They’re done when the tops spring back if lightly pressed and the edges look set.
  • Ganache Consistency: If your ganache is too runny, let it cool longer, or pop it in the fridge for a few minutes. If it’s too stiff, microwave for a few seconds and stir until smooth.
  • Multitasking: Start the ganache before the batter. While it cools, prep the rest. Clean up as you goβ€”sticky chocolate is easier to tackle before it sets.

One time, I forgot to bring my eggs to room temp and the batter split. The cupcakes were still edible but the crumb was a little rough. Lesson learned! If you’re short on time, set eggs in a bowl of warm water for 10 minutes.

Finally, always taste your chocolateβ€”good chocolate makes great cupcakes. And don’t skip the salt. It makes the chocolate flavor pop!

Variations & Adaptations

This swirled chocolate cupcakes recipe is endlessly flexible. Here are some of my favorite twists:

  • Gluten-Free: Swap in a good 1:1 gluten-free flour blend. I’ve tried Bob’s Red Mill and King Arthurβ€”both work well. Just be sure to check the cupcakes a minute or two early; they sometimes bake faster.
  • Flavor Swaps: Add a teaspoon of instant espresso powder to the batter for mocha cupcakes. Or stir in a pinch of cinnamon or cardamom for a cozy, spiced version. Around the holidays, peppermint extract in the ganache is a hit!
  • Dairy-Free: Use vegan butter and plant-based milk for the batter. For the ganache, full-fat coconut cream is rich and dreamy. I’ve made these for friends with dairy allergies and they still get rave reviews.
  • Double Chocolate: Skip the white chocolate and use only dark or semi-sweet chocolate chips for an extra-deep chocolate experience.
  • Fruit Swirl: Marble a spoonful of raspberry or cherry jam into the batter along with the ganache for a fruity burst. (My daughter requests this version every Valentine’s Day!)

Customization is the name of the game here. If you love nuts, toss in a handful of chopped pecans or walnuts. You can even fill the center with peanut butter ganache or Nutella. The only rule: have fun with it! My personal favorite is a double swirlβ€”half dark chocolate, half raspberry jam. It’s a little messy, but so worth it.

Serving & Storage Suggestions

These swirled chocolate cupcakes are best served at room temperature, when the ganache is just slightly soft and silky. For a beautiful presentation, top each cupcake with a sprinkle of chocolate curls, a dusting of powdered sugar, or a swirl of whipped cream. I’ve even served them with fresh berries for a pop of color.

They pair perfectly with a hot cup of coffee, a tall glass of milk, or even a scoop of vanilla ice cream if you’re feeling extra indulgent. For parties, arrange them on a tiered cake standβ€”they always disappear fast!

For storage, keep cupcakes in an airtight container at room temperature for up to 2 days, or refrigerate for up to 5 days (let them come to room temp before serving for best flavor). You can also freeze the cupcakes (without toppings) for up to 2 months. Just wrap individually and thaw overnight in the fridge. To reheat, microwave for 10–15 seconds for a gooey, just-baked feel.

The flavors deepen after a dayβ€”if you can wait that long. The ganache gets even creamier, and the cupcake stays moist. Honestly, they’re pretty irresistible at every stage.

Nutritional Information & Benefits

Each swirled chocolate cupcake (with ganache) contains approximately:

  • Calories: 270
  • Fat: 14g
  • Carbs: 33g
  • Protein: 4g
  • Sugar: 21g

Chocolate (especially dark chocolate) is loaded with antioxidants and can boost moodβ€”so these cupcakes are happiness in disguise. Using real butter and milk provides a little calcium and protein, and you can easily make these gluten- or dairy-free for dietary needs.

Allergens: Contains wheat, eggs, milk, and may contain soy (check your chocolate). Always double-check if baking for someone with allergies. I love that you can tweak the recipe for different diets without losing that rich, chocolatey punch. For me, these cupcakes are a little treat that satisfies without going overboard, especially when shared!

Conclusion

If you’re searching for a show-stopping chocolate cupcake, this swirled chocolate cupcakes recipeβ€”with its creamy ganache center and dramatic marbled crumbβ€”is pure magic. It’s easy, flexible, and honestly just plain fun to make (and eat!).

I love how customizable these cupcakes areβ€”whether you’re baking for picky eaters, gluten-free friends, or just yourself on a rainy day. There’s a reason this recipe is a staple in my kitchen: it never fails to impress, and every bite feels like a little celebration.

So, what are you waiting for? Gather your ingredients, swirl up some chocolatey goodness, and let me know how it goes! Leave a comment with your favorite variation, share with a fellow cupcake lover, or snap a photo for Pinterestβ€”because these cupcakes deserve to be seen (and devoured). Happy baking, friends!

FAQs – Swirled Chocolate Cupcakes Recipe

How do I keep my ganache from leaking out of the cupcakes?

Make sure to cover the ganache completely with batter before baking. If the ganache is too runny, chill it for a few minutes so it thickens up before adding to the cupcakes.

Can I make these swirled chocolate cupcakes ahead of time?

Yes! Bake and cool the cupcakes, then store in an airtight container for up to 2 days. You can also freeze them without toppings for longer storage.

What’s the best way to get the perfect swirl effect?

Use a toothpick or skewer and gently swirl the batter and ganache with a figure-eight motion. Don’t overmix, or you’ll lose the marbled look.

Can I use other types of chocolate for the ganache?

Absolutely! Dark, semi-sweet, or even milk chocolate all work. Just pick your favorite for the fillingβ€”or try a mix!

How do I make these cupcakes gluten-free or dairy-free?

Use a 1:1 gluten-free flour blend for gluten-free cupcakes. For dairy-free, substitute plant-based butter, milk, and coconut cream for the ganache.

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swirled chocolate cupcakes - featured image

Swirled Chocolate Cupcakes Recipe – Easy Homemade Ganache Filled Treats


  • Author: Eloise
  • Total Time: 40 minutes
  • Yield: 12 cupcakes 1x

Description

Tender, marbled chocolate cupcakes with a surprise core of silky ganache. These easy homemade treats are perfect for any occasion and sure to impress with their dramatic swirl and rich, creamy center.


Ingredients

Scale
  • 1 cup all-purpose flour (120g)
  • 1/4 cup unsweetened cocoa powder (30g, Dutch-processed preferred)
  • 3/4 cup granulated sugar (150g)
  • 1/4 cup light brown sugar (50g)
  • 6 tbsp unsalted butter, softened (85g)
  • 1/4 cup vegetable oil (60ml)
  • 2 large eggs, room temperature
  • 2 tsp vanilla extract
  • 1/2 cup whole milk, room temperature (120ml)
  • 1 1/2 tsp baking powder
  • 1/2 tsp baking soda
  • 1/4 tsp salt
  • 1/2 cup dark chocolate chips (75g)
  • 1/2 cup white chocolate chips (75g)
  • For the Ganache Filling:
  • 3.5 oz dark chocolate, chopped or chips (100g, 60–70% cacao)
  • 1/3 cup plus 1 tbsp heavy cream (100ml)
  • For the Topping (optional):
  • Extra chocolate shavings or sprinkles
  • Powdered sugar

Instructions

  1. Preheat your oven to 350Β°F (175Β°C). Line a 12-cup muffin tin with cupcake liners or grease lightly with butter.
  2. Make the ganache: Place 100g chopped dark chocolate in a heatproof bowl. Heat 100ml heavy cream until just simmering, then pour over chocolate. Let sit 1 minute, then stir until smooth. Set aside to cool and thicken for 15–20 minutes.
  3. In a large bowl, whisk together flour, cocoa powder, granulated sugar, brown sugar, baking powder, baking soda, and salt.
  4. In another bowl, beat softened butter and vegetable oil until smooth and creamy. Beat in eggs one at a time, then add vanilla extract. Gradually mix in milk.
  5. Add wet ingredients to dry ingredients and mix gently until just combined. Do not overmix.
  6. Fold in dark chocolate chips and white chocolate chips.
  7. Spoon a heaping tablespoon of batter into each cupcake liner. Make a small well in the center and drop about 1 teaspoon of ganache into each. Top with another tablespoon of batter to cover the ganache. Liners should be about 3/4 full.
  8. Using a toothpick or skewer, gently swirl the batter and ganache together in each cupcake for a marbled effect.
  9. Bake for 18–20 minutes, or until a toothpick inserted at the edge comes out clean.
  10. Let cupcakes cool in the pan for 5 minutes, then transfer to a wire rack to cool completely.
  11. Once cooled, decorate with powdered sugar, chocolate shavings, or a drizzle of leftover ganache if desired.

Notes

For best results, use room temperature ingredients. Don’t overmix the batter to keep cupcakes tender. Swirl gently for a distinct marbled look. Ganache can be made dairy-free with coconut cream. Cupcakes can be made gluten-free with a 1:1 gluten-free flour blend. Store in an airtight container at room temperature for 2 days or refrigerate for up to 5 days. Freeze (without toppings) for up to 2 months.

  • Prep Time: 20 minutes
  • Cook Time: 20 minutes
  • Category: Dessert
  • Cuisine: American

Nutrition

  • Serving Size: 1 cupcake
  • Calories: 270
  • Sugar: 21
  • Sodium: 140
  • Fat: 14
  • Saturated Fat: 7
  • Carbohydrates: 33
  • Fiber: 2
  • Protein: 4

Keywords: chocolate cupcakes, swirled cupcakes, ganache filled cupcakes, marbled cupcakes, easy chocolate dessert, homemade cupcakes, party treats, kid friendly baking

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